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December 28, 2023
eDNA
Environmental DNA samples and metadata can be tracked using the open-source data management system medna-metadata.
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: Environmental DNA samples and metadata can be tracked using the open-source data management system medna-metadata.
December 28, 2023
RNA molecules
A curated collection of RNA-small molecule structures called HARIBOSS is available to support intelligent drug design.
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: A curated collection of RNA-small molecule structures called HARIBOSS is available to support intelligent drug design.
December 28, 2023
RNA
There is a good chance that deep learning models for RNA secondary structure prediction do not generalise to other families.
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: There is a good chance that deep learning models for RNA secondary structure prediction do not generalise to other families.
December 28, 2023
Protein family
Secondary structural consensus for protein families in OverProt
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: Secondary structural consensus for protein families in OverProt
December 28, 2023
protein design
Conditional generative modelling for hierarchical functions in de novo protein design
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: Conditional generative modelling for hierarchical functions in de novo protein design
December 28, 2023
protein structure
OpenMDlr is a set of parallel, open-source tools for modelling and refining protein structures using pairwise distances.
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: OpenMDlr is a set of parallel, open-source tools for modelling and refining protein structures using pairwise distances.
December 28, 2023
protein structure
Structure-based predictions of protein aggregation for the human proteome in the A3D database
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: Structure-based predictions of protein aggregation for the human proteome in the A3D database
December 28, 2023
microRNA
scanMiR is a biochemically based toolset for predicting microRNA targets that is both diverse and efficient
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: scanMiR is a biochemically based toolset for predicting microRNA targets that is both diverse and efficient
December 28, 2023
gene ontology
TransformerGO: modelling the attention between groups of gene ontology
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: TransformerGO: modelling the attention between groups of gene ontology
December 28, 2023
homologous recombination
RCandy: Visualization of bacterial recombination using R package
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: RCandy: Visualization of bacterial recombination using R package
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