In the present study Younesy et al.(2016) have developed a desktop application for interactive visualization of epigenomic data like CHIP- seq experiments. The application involved close interaction of biologists and bioinformaticians. K means clustering has been used for analysing the data.
The result of clustering can be explored by a heat map and profile plot interface. The source code and software can be obtained from the following website http://chase.cs.univie.ac.at.
Reference:
Younesey H. et al.(2016) ChAsE: Chromatin analysis and exploration tool. Bioinformatics 32 (21) 3324-3326.
Leave a Reply